Populations » Publication Details

Population: 
   

  

Costa Rica Amerindians

Polymorphic Region:
HLA

Demographic Data

 
  Ethnic origin: Amerindian/Native American
  Geographic Region: South and Central America
  Latitude: 9° 34' N
  Longitude: 83° 25' W
  Family: Not Known
  Urban/Rural: Rural

Sample Data

 
  Sample Size: 125 (A = 124, B = 123, C = 122, DRB1 = 120)
  Test date: 2014
  Method(s): SBT, Sequencing
  Source: Anthropology Study
  Loci typed: A, B, C, DRB1
  Additional notes: Costa Rican Amerindians (CRAI) were sampled exclusively in 5 different indigenous reservations and included individuals from the Chorotega (n=16), Maleku (n=26), Huetar (n=34), Cabécar (n=43), and Ngöbe (n=6) ethnicities. See publication for details.
 

Bibliographic Reference

 
  Author(s): Esteban Arrieta-BolañosInstitute for Experimental Cellular T
  Publication details: Arrieta-Bolaños E, Madrigal-Sánchez JJ, Stein JE, Órlich-Pérez P, Moreira-Espinoza MJ, Paredes-Carias E, Vanegas-Padilla Y, Salazar-Sánchez L, Alejandro Madrigal J, Marsh SGE, Shaw BE. High-resolution HLA allele and haplotype frequencies in majority and minority populations of Costa Rica and Nicaragua: differential admixture proportions in neighboring countries. HLA. 2018 Jun;91(6):514–29.
  Author's e-mail: esteban.arrieta-bolanos@uk-essen.de
 

Frequency Data

 
Allele Frequencies Haplotype Frequencies  Genotype Data
(download csv)
Ambiguity-resolved Genotype Data
(download csv)
 




   

Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.
Gonzalez-Galarza FF, Takeshita LY, Santos EJ, Kempson F, Maia MH, Silva AL, Silva AL, Ghattaoraya GS, Alfirevic A, Jones AR and Middleton D Nucleic Acid Research 2015, 39, 28, D784-8.
Liverpool, U.K.

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