HLA > Allele Frequency Search > Classical

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Displaying 1 to 100 (from 102) records   Pages: 1 2 of 2  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   A*01:01:01  Costa Rica Amerindians (G) 4.8 (*) 0.0240 (*)125See
 2   A*01:02  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 3   A*02:01:01  Costa Rica Amerindians (G) 18.6 (*) 0.0930 (*)125See
 4   A*02:05:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 5   A*02:06:01  Costa Rica Amerindians (G) 8.8 (*) 0.0440 (*)125See
 6   A*02:11:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 7   A*02:22:01  Costa Rica Amerindians (G) 5.6 (*) 0.0280 (*)125See
 8   A*03:01:01  Costa Rica Amerindians (G) 2.4 (*) 0.0160 (*)125See
 9   A*11:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 10   A*23:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 11   A*24:02:01  Costa Rica Amerindians (G) 56.5 (*) 0.3510 (*)125See
 12   A*24:03:02  Costa Rica Amerindians (G) 5.6 (*) 0.0320 (*)125See
 13   A*24:72  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 14   A*25:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 15   A*26:01:01  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 16   A*29:02:01  Costa Rica Amerindians (G) 7.2 (*) 0.0360 (*)125See
 17   A*30:04:01  Costa Rica Amerindians (G) 2.4 (*) 0.0120 (*)125See
 18   A*31:01:02  Costa Rica Amerindians (G) 6.4 (*) 0.0320 (*)125See
 19   A*36:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 20   A*66:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 21   A*68:01:02  Costa Rica Amerindians (G) 33.0 (*) 0.1770 (*)125See
 22   A*68:02:01  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 23   A*68:05  Costa Rica Amerindians (G) 2.4 (*) 0.0120 (*)125See
 24   A*68:30  Costa Rica Amerindians (G) 12.2 (*) 0.0690 (*)125See
 25   B*07:02:01  Costa Rica Amerindians (G) 4.0 (*) 0.0200 (*)125See
 26   B*08:01:01  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 27   B*13:02:01  Costa Rica Amerindians (G) 2.4 (*) 0.0120 (*)125See
 28   B*14:02:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 29   B*15:01:01  Costa Rica Amerindians (G) 7.4 (*) 0.0370 (*)125See
 30   B*15:10:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 31   B*18:01:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 32   B*35:01:01  Costa Rica Amerindians (G) 29.4 (*) 0.1550 (*)125See
 33   B*35:08:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 34   B*35:12:01  Costa Rica Amerindians (G) 2.4 (*) 0.0120 (*)125See
 35   B*35:17:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 36   B*35:43:01  Costa Rica Amerindians (G) 20.3 (*) 0.1340 (*)125See
 37   B*37:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 38   B*38:01:01  Costa Rica Amerindians (G) 5.8 (*) 0.0290 (*)125See
 39   B*39:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 40   B*39:02:02  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 41   B*39:05:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 42   B*39:06:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 43   B*39:08  Costa Rica Amerindians (G) 4.8 (*) 0.0240 (*)125See
 44   B*40:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 45   B*40:02:01  Costa Rica Amerindians (G) 57.8 (*) 0.3580 (*)125See
 46   B*40:11:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 47   B*40:20  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 48   B*40:27:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 49   B*44:02:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 50   B*44:03:01  Costa Rica Amerindians (G) 4.0 (*) 0.0200 (*)125See
 51   B*45:01  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 52   B*48:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 53   B*49:01:01  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 54   B*51:01:01  Costa Rica Amerindians (G) 5.8 (*) 0.0290 (*)125See
 55   B*52:01:02  Costa Rica Amerindians (G) 2.4 (*) 0.0120 (*)125See
 56   B*53:01:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 57   B*55:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 58   B*56:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 59   C*01:02:01  Costa Rica Amerindians (G) 23.8 (*) 0.1520 (*)125See
 60   C*02:02:02  Costa Rica Amerindians (G) 3.2 (*) 0.0160 (*)125See
 61   C*03:03:01  Costa Rica Amerindians (G) 8.2 (*) 0.0410 (*)125See
 62   C*03:04:01  Costa Rica Amerindians (G) 15.6 (*) 0.0820 (*)125See
 63   C*03:04:02  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 64   C*03:05  Costa Rica Amerindians (G) 58.3 (*) 0.3610 (*)125See
 65   C*04:01:01  Costa Rica Amerindians (G) 27.8 (*) 0.1390 (*)125See
 66   C*05:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 67   C*06:02:01  Costa Rica Amerindians (G) 5.8 (*) 0.0290 (*)125See
 68   C*07:01:01  Costa Rica Amerindians (G) 5.8 (*) 0.0290 (*)125See
 69   C*07:02:01  Costa Rica Amerindians (G) 9.0 (*) 0.0450 (*)125See
 70   C*07:04:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 71   C*08:01:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 72   C*08:02:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 73   C*12:03:01  Costa Rica Amerindians (G) 6.6 (*) 0.0330 (*)125See
 74   C*15:02:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 75   C*15:09  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 76   C*16:01:01  Costa Rica Amerindians (G) 6.6 (*) 0.0330 (*)125See
 77   DRB1*01:01  Costa Rica Amerindians (G) 5.8 (*) 0.0330 (*)125See
 78   DRB1*03:01  Costa Rica Amerindians (G) 3.4 (*) 0.0170 (*)125See
 79   DRB1*04:01:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 80   DRB1*04:03:01  Costa Rica Amerindians (G) 2.6 (*) 0.0130 (*)125See
 81   DRB1*04:04:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 82   DRB1*04:05:04  Costa Rica Amerindians (G) 4.2 (*) 0.0210 (*)125See
 83   DRB1*04:06:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 84   DRB1*04:07  Costa Rica Amerindians (G) 55.0 (*) 0.3540 (*)125See
 85   DRB1*04:11:01  Costa Rica Amerindians (G) 5.0 (*) 0.0250 (*)125See
 86   DRB1*07:01  Costa Rica Amerindians (G) 8.4 (*) 0.0460 (*)125See
 87   DRB1*08:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 88   DRB1*08:02:01  Costa Rica Amerindians (G) 19.2 (*) 0.0960 (*)125See
 89   DRB1*08:02:02  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 90   DRB1*08:04:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 91   DRB1*10:01:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 92   DRB1*11:01  Costa Rica Amerindians (G) 5.0 (*) 0.0250 (*)125See
 93   DRB1*11:01:02  Costa Rica Amerindians (G) 2.6 (*) 0.0130 (*)125See
 94   DRB1*11:02:01  Costa Rica Amerindians (G) 1.6 (*) 0.0080 (*)125See
 95   DRB1*13:01  Costa Rica Amerindians (G) 3.4 (*) 0.0210 (*)125See
 96   DRB1*13:02:01  Costa Rica Amerindians (G) 2.6 (*) 0.0130 (*)125See
 97   DRB1*13:03:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See
 98   DRB1*14:01  Costa Rica Amerindians (G) 2.6 (*) 0.0130 (*)125See
 99   DRB1*14:02  Costa Rica Amerindians (G) 15.1 (*) 0.0920 (*)125See
 100   DRB1*14:06:01  Costa Rica Amerindians (G) 0.8 (*) 0.0040 (*)125See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Displaying 1 to 100 (from 102) records   Pages: 1 2 of 2  





   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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