HLA > Allele Frequency Search > Classical

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Displaying 1 to 48 (from 48) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   A*01:01  New Zealand Maori with Full Ancestry 8.7 0.044046See
 2   A*02:01  New Zealand Maori with Full Ancestry 6.5 0.033046See
 3   A*02:05  New Zealand Maori with Full Ancestry 2.2 0.011046See
 4   A*02:06  New Zealand Maori with Full Ancestry 52.2 0.294046See
 5   A*02:12  New Zealand Maori with Full Ancestry 2.2 0.011046See
 6   A*11:01  New Zealand Maori with Full Ancestry 30.4 0.163046See
 7   A*24  New Zealand Maori with Full Ancestry 2.2 0.011046See
 8   A*24:02  New Zealand Maori with Full Ancestry 65.2 0.380046See
 9   A*34:01  New Zealand Maori with Full Ancestry 10.9 0.054046See
 10   B*07:02  New Zealand Maori with Full Ancestry 2.2 0.011046See
 11   B*07:05  New Zealand Maori with Full Ancestry 2.2 0.011046See
 12   B*08:01  New Zealand Maori with Full Ancestry 4.3 0.022046See
 13   B*13:01  New Zealand Maori with Full Ancestry 8.7 0.044046See
 14   B*27:04  New Zealand Maori with Full Ancestry 2.2 0.011046See
 15   B*39:01  New Zealand Maori with Full Ancestry 17.4 0.087046See
 16   B*40:01  New Zealand Maori with Full Ancestry 21.7 0.109046See
 17   B*40:02  New Zealand Maori with Full Ancestry 4.3 0.022046See
 18   B*40:10  New Zealand Maori with Full Ancestry 17.4 0.087046See
 19   B*44:02  New Zealand Maori with Full Ancestry 4.3 0.022046See
 20   B*48:01  New Zealand Maori with Full Ancestry 23.9 0.141046See
 21   B*55:02  New Zealand Maori with Full Ancestry 63.0 0.359046See
 22   B*56:01  New Zealand Maori with Full Ancestry 2.2 0.011046See
 23   B*56:02  New Zealand Maori with Full Ancestry 13.0 0.065046See
 24   C*01:02  New Zealand Maori with Full Ancestry 71.7 0.446046See
 25   C*03:04  New Zealand Maori with Full Ancestry 2.2 0.011046See
 26   C*04:01  New Zealand Maori with Full Ancestry 19.6 0.098046See
 27   C*04:03  New Zealand Maori with Full Ancestry 17.4 0.087046See
 28   C*05:01  New Zealand Maori with Full Ancestry 2.2 0.011046See
 29   C*07:01  New Zealand Maori with Full Ancestry 4.3 0.022046See
 30   C*07:02  New Zealand Maori with Full Ancestry 19.6 0.109046See
 31   C*07:04  New Zealand Maori with Full Ancestry 2.2 0.011046See
 32   C*08:01  New Zealand Maori with Full Ancestry 21.7 0.130046See
 33   C*12:02  New Zealand Maori with Full Ancestry 2.2 0.011046See
 34   C*12:03  New Zealand Maori with Full Ancestry 6.5 0.033046See
 35   C*15:02  New Zealand Maori with Full Ancestry 4.3 0.022046See
 36   C*15:05  New Zealand Maori with Full Ancestry 2.2 0.011046See
 37   DRB1*03:01  New Zealand Maori with Full Ancestry 4.3 0.022046See
 38   DRB1*04:01  New Zealand Maori with Full Ancestry 6.5 0.033046See
 39   DRB1*04:03  New Zealand Maori with Full Ancestry 17.4 0.109046See
 40   DRB1*04:05  New Zealand Maori with Full Ancestry 8.7 0.044046See
 41   DRB1*08:03  New Zealand Maori with Full Ancestry 30.4 0.196046See
 42   DRB1*09:01  New Zealand Maori with Full Ancestry 21.7 0.109046See
 43   DRB1*11:01  New Zealand Maori with Full Ancestry 37.0 0.185046See
 44   DRB1*12:01  New Zealand Maori with Full Ancestry 43.5 0.239046See
 45   DRB1*14:01  New Zealand Maori with Full Ancestry 2.2 0.011046See
 46   DRB1*14:08  New Zealand Maori with Full Ancestry 4.3 0.022046See
 47   DRB1*14:54  New Zealand Maori with Full Ancestry 4.3 0.022046See
 48   DRB1*15:01  New Zealand Maori with Full Ancestry 2.2 0.011046See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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