Allele frequencies over 50% or the percentage of individuals > 75%
This page shows a list of all populations that have allele frequencies over 50%. In some cases, AFND only receives the percentage of individuals that have the allele, thus, assuming Hardy-Weinberg Proportions, we also show those populations that have > 75% of the individuals with that allele.
| Population | Alleles | Allele Frequency | % population that have the allele | Argentina Chaco Region El Sauzalito Mataco | DPB1*04:02 | 0.70000 | Argentina Chiriguano | DPB1*04:02 | 0.54100 | 77.60 | DQA1*05:01 | 0.59800 | 89.30 | DQB1*03:01 | 0.61100 | 88.90 | Argentina Gran Chaco Eastern Toba | DPB1*04:02 | 0.60000 | Argentina Gran Chaco Mataco Wichi | DPB1*04:02 | 0.62200 | Argentina Salta Wichi pop 2 | DPB1*04:02 | 0.61100 | 88.90 | Australia Kimberly Aborigine | A*34:01 | 0.68100 | DPB1*05:01 | 0.68400 | Bolivia La Paz Aymaras | A*02 | 0.60300 | Bolivia Quechua | A*02 | 0.50725 | Bolivia/Chile Aymara NA-DHS_13 (G) | A*02:01:01:01 | 0.57500 | 85.00 | C*04:01:01:01 | 0.52500 | 75.00 | Bolivia/Peru Quechua NA-DHS_12 (G) | A*02:01:01:01 | 0.66667 | 85.71 | Brazil Barra Mansa Rio State Caucasian | DPA1*01:03:01 | 0.70588 | Brazil Central Plateau Xavante | DPB1*04:02 | 0.79900 | DQA1*05:01 | 0.61400 | DQB1*03:01 | 0.61500 | Brazil East Amazon | DRB1*04:11 | 0.63400 | Brazil Guarani Kaiowa | DQA1*05 | 0.54800 | DQA1*05:01 | 0.54800 | DQB1*03:01 | 0.54800 | Brazil Guarani M bya | DQA1*05 | 0.54800 | DQA1*05:01 | 0.54800 | DQB1*03:01 | 0.53200 | Brazil Guarani Nandeva | DQA1*05 | 0.59300 | DQA1*05:01 | 0.59300 | DQB1*03 | 0.72600 | DQB1*03:01 | 0.58100 | Brazil Kaingang | DQA1*04 | 0.51200 | DQA1*04:01 | 0.51200 | DQB1*04:02 | 0.51000 | Brazil Rio de Janeiro Black | DPA1*01:03:01 | 0.60000 | Brazil Rio de Janeiro Caucasian | DPA1*01:03:01 | 0.71040 | Brazil Rio de Janeiro Parda | DPA1*01:03:01 | 0.58500 | Brazil Sao Paulo Mixed | DQA1*01 | 0.47400 | 86.10 | Brazil Terena | DQB1*03:01 | 0.58300 | 86.67 | Brazil Ticuna | DPA1*01:03 | 0.71700 | Canada Chipewyan NA-DHS_2 (G) | A*02:01:01:01 | 0.48000 | 76.00 | Central African Republic Aka Pygmy | DPB1*04:02 | 0.69500 | Central African Republic Mbenzele Pygmy | C*02:02 | 77.00 | China Guizhou Province Miao | DPB1*05:01 | 0.51200 | China North Han pop 3 | DMA*01:01 | 0.72830 | DMB*01:01 | 0.52220 | China Pumi | DPB1*05:01 | 0.52000 | China South Han pop 3 | DMA*01:01 | 0.66220 | DMB*01:01 | 0.52750 | China Yunnan Bulang | A*11:01 | 0.54300 | DRB1*12:02 | 0.55600 | China Yunnan Hani | A*11:01 | 0.61300 | China Yunnan Province Blang | DPB1*05:01 | 0.51000 | China Yunnan Province Drung | DQB1*05:02:01 | 0.68600 | DRB1*14:01:01 | 0.80700 | China Yunnan Province Wa | A*11:01:01 | 0.58400 | China Yunnan Province Yao | DPB1*05:01 | 0.53800 | China Zhejiang Han pop 2 | DPA1*02:02 | 0.53300 | Colombia Amazon Region Coreguaje | DQA1*03:01 | 0.75000 | DQB1*03:02 | 0.78300 | Colombia Amazon Region Coreguaje pop 2 | DPB1*14:01 | 0.52200 | Colombia Amazon Region Vaupes | DPB1*04:02 | 0.89100 | Colombia East Amazon Region Nukak | DPB1*04:02 | 0.80000 | DQA1*05:01 | 0.72500 | DQB1*03:01 | 0.72500 | DRB1*14:02 | 0.65000 | Colombia Embera NA-DHS_19 (G) | A*24:02:01:01 | 0.53571 | 92.86 | Colombia Guajira Desert Wayuu | DPB1*14:01 | 0.57500 | Colombia Jaidukama | A*24 | 0.69200 | DQB1*03:02 | 0.55800 | Colombia Kogi NA-DHS_17 (G) | C*01:02:01 | 0.57143 | 92.86 | DRB1*04:07:01 | 0.50000 | 92.86 | Colombia Mestizo pop 2 | E*01:01 | 79.00 | Colombia North Chimila Amerindians | DQB1*03:02 | 0.54250 | DRB1*04:07 | 0.53190 | Colombia North Eastern Plains Sikuani | DPB1*04:02 | 0.81500 | DQA1*05:01 | 0.77800 | DQB1*03:01 | 0.77800 | Colombia North Wiwa El Encanto | C*01:02 | 0.50962 | DQB1*03:02 | 0.62500 | DRB1*04:07 | 0.53846 | Colombia Northwest Tule | DPB1*04:02 | 0.53400 | DQA1*03:01 | 0.65500 | Colombia Pacific Coast Region Embera | DPB1*04:02 | 0.57100 | Colombia Sierra Nevada de Santa Marta Arsario pop 2 | DPB1*14:01 | 0.73000 | Colombia Sierra Nevada de Santa Marta Ijka | DPB1*04:02 | 0.57500 | Colombia Sierra Nevada de Santa Marta Ijka pop 2 | DPB1*04:02 | 0.56700 | DQA1*04:01 | 0.63300 | DQB1*04:02 | 0.63300 | DRB1*08:02 | 0.61700 | Colombia Sierra Nevada de Santa Marta Kogi | DQA1*03 | 0.67200 | DQB1*03:02 | 0.63500 | DRB1*04:07 | 0.55200 | Colombia Sierra Nevada de Santa Marta Kogi pop 2 | DPB1*14:01 | 0.64000 | Colombia Sierra Nevada de Santa Marta Kogi pop 3 | DQA1*03:01 | 0.72600 | DQB1*03:02 | 0.72600 | DRB1*04:07 | 0.61300 | Colombia Waunana NA-DHS_20 (G) | A*24:02:01:01 | 0.60000 | 85.00 | Colombia Wayu from Guajira Peninsula | DQB1*03:02 | 0.60417 | Colombia West Embera | DQA1*05:01 | 0.55000 | DQB1*03:01 | 0.57500 | Colombia West Waunana | DPB1*04:02 | 0.55000 | DQA1*05:01 | 0.61700 | DQB1*03:01 | 0.61700 | Colombia Zenu NA-DHS_18 (G) | DRB1*03:02:02 | 0.62500 | 83.33 | Colombia/Brazil Ticuna Tarapaca NA-DHS_22 (G) | A*24:02:01:01 | 0.52632 | 73.68 | C*03:04:01 | 0.52941 | 70.59 | DRB1*04:11 | 0.55263 | 84.21 | Cook Islands | DPA1*01:03:01 | 0.54000 | Costa Rica and Panama Mestizo | DPB1*04:02 | 0.72000 | Costa Rica Cabecar NA-DHS_9 (G) | B*40:02:01 | 0.50000 | 78.95 | C*03:05 | 0.50000 | 78.95 | Costa Rica Guaymi NA-DHS_10 (G) | A*02:22 | 0.44444 | 83.33 | B*35:01:01 | 0.41667 | 77.78 | C*04:01:01:01 | 0.47222 | 77.78 | DRB1*04:05:04 | 0.44444 | 77.78 | Croatia Krk Island Vrbnik | DQA1*05:01 | 0.51800 | Denmark pop 2 | G*01:01 | 0.56700 | Ecuador Amerindians | G*01:01 | 0.73016 | Ecuador Cayapa | A*02:12 | 0.60000 | A*24:02 | 0.61400 | DQA1*03 | 0.59000 | Ecuadorean Amerindians | DMB*01:01 | 0.70000 | England pop 4 | E*01:01 | 0.56700 | France Ceph | DPA1*01:03 | 0.81800 | France Southeast | DPB1*04 | 0.55200 | 90.80 | Gambia | DPA1*02:01:01 | 0.55800 | Germany pop 4 | DMA*01:01 | 95.60 | DMB*01:01 | 97.80 | Germany pop 5 | G*01:01 | 0.87400 | Ghana | G*01:01:01 | 0.83300 | Hong Kong Chinese HKBMDR HLA 11 loci | DPA1*02:02:02 | 0.55241 | 79.30 | Hong Kong Chinese HKBMDR. DQ and DP | DPA1*02:02 | 0.55780 | 78.70 | India Bombay | DPA1*01:03 | 0.59300 | India Kerala Hindu Pulaya | A*11 | 0.53100 | India Lucknow pop 2 | E*01:01 | 0.70400 | Indonesia Java | DRB1*12:02 | 0.53400 | Indonesia Java Yogyakarta Region | DRB1*12:02 | 0.50700 | Iraq Erbil | DQB1*03 | 0.48100 | 92.70 | Ireland Northern pop 3 | DPB1*04:01 | 0.51600 | 75.30 | Italy Sardinia pop2 | DQB1*02:01 | 0.59000 | 86.30 | DRB1*03:01 | 0.55700 | 83.00 | Jordan Amman | DRB1*03:04 | 0.51700 | Liberia Bong County | DPB1*01:01 | 0.55900 | Malaysia Perak and Johor Banjar Bugis Jawa | DQB1*03 | 0.50500 | Malaysia Sabah Dusun | DRB1*15:02 | 0.52100 | Mexico Chiapas Lacandon Mayans | DPA1*01:03 | 0.90140 | DPB1*04:02 | 0.77750 | DQA1*03:01 | 0.69500 | DQB1*03:02 | 0.69500 | Mexico Chichen Itza Maya (prehispanic) | DPA1*01:03 | 0.87230 | DPB1*04:02 | 0.80850 | DQA1*03:01 | 0.51060 | Mexico Chihuahua Tarahumara | DPB1*04:02 | 0.63600 | Mexico Huasteca Region Teenek | DQB1*03:02 | 0.63700 | Mexico Mayan | DPB1*04:02 | 0.73300 | DQA1*03:01:01 | 0.70000 | DQB1*03:02 | 0.60000 | DRB1*04:07 | 0.53300 | Mexico Mayan pop 2 | DQA1*03:01:01 | 0.79000 | DQB1*03:02 | 0.77800 | DRB1*04:11 | 0.57400 | Mexico Mazatecan pop 2 | E*01:01 | 86.00 | Mexico Mestizo pop 2 | E*01:01 | 81.40 | Mexico Oaxaca Mixe | DPB1*04:02 | 0.90700 | Mexico Oaxaca Mixtec | DPB1*04:02 | 0.75700 | Mexico Oaxaca Zapotec | DPB1*04:02 | 0.71100 | Mexico San Vicente Tancuayalab Teenek/Huastecos | DQB1*03:02 | 0.64151 | Mexico Sinaloa Capomos Mayo Yoremes | DQB1*03:02 | 0.62500 | DRB1*04:07 | 0.50833 | Mexico Sonora Seri | A*02:01 | 0.54500 | DPA1*01:03 | 0.86000 | Mexico Tapachula, Chiapas Mestizo Population | DPA1*01 | 0.78570 | 98.57 | DQB1*03 | 0.56940 | 75.00 | Mexico Tixcacaltuyub Maya | DPA1*01:03 | 0.91040 | DPB1*04:02 | 0.82090 | DQA1*03:01 | 0.69400 | DQB1*03:02 | 0.70150 | Mongolia Tarialan Khoton | DPA1*01 | 0.73500 | Mongolia Ulaanbaatar Khalkha | DPA1*01 | 0.73200 | Myanmar Chin | B*15 | 0.50000 | 76.40 | Myanmar Kachin | A*11 | 0.63490 | 82.50 | Myanmar Kayah | A*11 | 0.65450 | 89.10 | B*15 | 0.60910 | 85.50 | DRB1*15 | 0.61820 | 83.60 | Myanmar Kayin | B*15 | 0.53410 | 79.50 | C*04 | 0.52270 | 79.50 | DPB1*02 | 0.55680 | 88.60 | DQB1*03 | 0.54550 | 75.00 | New Caledonia | A*24:02 | 0.60700 | New Zealand Maori pop 2 | DPA1*01:03 | 0.47700 | 77.30 | Nigeria Southwest Abanla Yoruba | DPB1*01:01 | 0.53100 | Niue pop 2 | DPA1*02:02 | 0.72600 | 96.80 | DPB1*05:01 | 0.68800 | 96.90 | Norway | DPA1*01 | 0.86000 | Norway ethnic Norwegians | DPB1*04 | 0.55960 | 80.60 | Papua New Guinea East New Britain Rabaul | C*07:02 | 0.57100 | Papua New Guinea East New Britain Tolai | DPB1*02:01 | 0.56500 | DRB1*11:01 | 0.54300 | Papua New Guinea Eastern Highlands Goroka Asaro | A*24:02 | 0.74400 | Papua New Guinea Highland pop2 | DPA1*01:03 | 0.77600 | Papua New Guinea Karimui Plateau Pawaia | A*24:02 | 0.74400 | Papua New Guinea Lowland Roro | DPB1*05:01 | 0.70800 | Papua New Guinea Lowland Wosera | DQB1*03:01 | 0.58700 | DRB1*11:01 | 0.56800 | Papua New Guinea Madang | A*11:01 | 0.63600 | DQA1*05:01 | 0.52300 | DQB1*03:01 | 0.52300 | Papua New Guinea Trobriand Island | DPB1*05:01 | 0.97600 | Papua New Guinea Wanigela Keapara | A*24:02 | 0.62700 | Papua New Guinea West Schrader Ranges Haruai | A*11:01 | 0.55000 | Papua New Guinea Wosera Abelam | A*24:02 | 0.51300 | Paraguay Aché | DQA1*03 | 0.74700 | DQB1*03:02 | 0.74700 | DRB1*04:11 | 0.74100 | Paraguay Lengua | DRB1*14:06 | 0.64700 | Paraguay/Argentina Ache NA-DHS_24 (G) | A*68:01:02 | 0.61539 | 92.31 | B*40:04 | 0.63636 | 100.00 | C*03:04:01 | 0.75000 | 100.00 | DRB1*04:11 | 0.83333 | 100.00 | Peru Arequipa Mestizo | A*02 | 0.54500 | 79.10 | Peru Lamas City Lama | A*02 | 0.63400 | Peru Titikaka Lake Uro | B*35:05 | 0.51500 | Peru Titikaka Lake Uros | B*35:05 | 0.51400 | Poland pop 2 | G*01:01:01 | 0.52600 | Portugal Azores Terceira Island | E*01:01:01 | 0.53070 | 75.44 | F*01:01:01 | 0.67110 | 92.98 | G*01:01 | 0.77190 | 97.37 | Russia Belgorod region | DPA1*01:03:01 | 0.83660 | 98.04 | Russia Sakhalin Island Nivkhi | A*24 | 0.50900 | Russia Siberia Chukchi | DQB1*03:01 | 0.54000 | Russia Siberia Chukotka Peninsula Chukchi | DPA1*01 | 0.93000 | DPB1*02:01:02 | 0.58000 | DQA1*03 | 0.51000 | DQB1*03:01 | 0.60000 | Russia Siberia Chukotka Peninsula Eskimo | DPA1*01 | 0.96000 | DPB1*02:01:02 | 0.55000 | DQB1*03:01 | 0.67000 | DQB1*05:03:01 | 0.60000 | Russia Siberia Eskimo | DQB1*03:01 | 0.64400 | Russia Siberia Gvaysugi Udege | DPA1*01 | 0.74000 | DPB1*02:01:02 | 0.63000 | Russia Siberia North East Kamchatka Koryak | DPA1*01 | 0.96000 | DPB1*02:01:02 | 0.66000 | DQA1*03 | 0.66000 | DQB1*03:01 | 0.55000 | Russia Siberia NW of Sakhalin Island Nivkh | DPA1*01 | 0.79000 | DPB1*02:01:02 | 0.64000 | Russia Siberia Polygus Evenk | DPA1*01 | 0.97000 | DPB1*02:01:02 | 0.60000 | DQB1*03:01 | 0.66000 | Russia Siberia Sulamai Ket | DPA1*01 | 0.85000 | DPB1*02:01:02 | 0.55000 | DQB1*03:01 | 0.52000 | Russia Tuva pop 2 | DPA1*01:03 | 0.76600 | Russian Federation Vologda Region | DPA1*01:03:01 | 0.86135 | 98.32 | Samoa | DPB1*05:01 | 0.62100 | Samoa pop 3 | DPA1*02:02 | 0.61900 | 76.20 | DPB1*05:01 | 0.62500 | 80.00 | Samoa pop2 | DPA1*02:02:02 | 0.57000 | DPB1*05:01 | 0.56000 | Samoa West | DPB1*05:01 | 0.70400 | Saudi Arabia pop 3 | DPB1*04:01 | 0.68000 | Singapore SGVP Chinese CHS | DPA1*02:02 | 0.59100 | DQA1*01:02 | 0.61700 | Singapore SGVP Malay MAS | DQA1*01:02 | 0.69700 | Singapore SGVP. Indian INS | DPA1*01:03 | 0.64000 | DRB1*07:01 | 0.90300 | Slovenia | DPA1*01:03:01 | 97.00 | Spain | E*01:01 | 81.60 | Spain Gipuzkoa Basque | DPA1*01:03 | 0.77500 | Spain Navarre Basques | DPA1*01:03 | 0.76700 | Spain pop 2 | G*01:01:01 | 76.30 | Sudan Khartoum | C*06 | 0.59180 | Sweden pop 2 | DPA1*01:03 | 0.86500 | Taiwan Aborigine | A*24 | 0.60400 | Taiwan Aborigine pop 2 | DPB1*05:01 | 0.69800 | Taiwan Ami | A*24:02 | 0.62800 | 84.70 | Taiwan Ami pop 2 | DPB1*05:01 | 0.80000 | Taiwan Atayal | A*24:02 | 0.61800 | 82.10 | Taiwan Atayal pop 2 | DPB1*05:01 | 0.80000 | Taiwan Bunun | A*24:02 | 0.58400 | 84.20 | Taiwan Bunun pop 2 | DPB1*05:01 | 0.78000 | Taiwan Chinese immigrants from South China | DRB1*08 | 0.72000 | Taiwan Han | DPB1*05:01 | 0.55700 | Taiwan Paiwan | A*24:02 | 0.86300 | 96.10 | C*03:04:01 | 0.52000 | 76.50 | Taiwan Paiwan pop 2 | DPB1*05:01 | 0.66000 | Taiwan Puyuma | A*24:02 | 0.64000 | 88.00 | Taiwan Puyuma pop 2 | DPB1*05:01 | 0.76000 | Taiwan Rukai | A*24:02 | 0.76000 | 96.00 | C*03:04:01 | 0.47000 | 82.00 | Taiwan Rukai pop 2 | DPB1*05:01 | 0.80000 | Taiwan Saisiat | A*24:02 | 0.56900 | 86.30 | B*39:01 | 0.54900 | 82.40 | C*07:02 | 0.66700 | 92.20 | Taiwan Saisiat pop 2 | DPB1*05:01 | 0.76000 | Taiwan Siraya | A*24:02 | 0.47100 | 78.40 | Taiwan Tao | A*24:02 | 0.54000 | 78.00 | Taiwan Thao | A*24:02 | 0.60000 | 90.00 | Taiwan Tsou | A*24:02 | 0.78400 | 98.00 | Taiwan Tsou pop 2 | DPB1*05:01 | 0.57000 | Thailand Bangkok pop 4 | E*01:03 | 0.57500 | Tokelau | DPA1*01:03:01 | 0.73000 | Tonga | DPA1*02:02:02 | 0.53000 | DPB1*05:01 | 0.52000 | Tonga pop 2 | DPA1*02:02 | 0.62200 | 86.70 | DPB1*05:01 | 0.58900 | 84.40 | Trinidad South Asian | DQA1*01 | 0.59000 | Turkey pop 4 | DMA*01:01 | 0.84900 | DMB*01:01 | 0.80900 | United Kingdom | DPA1*01 | 0.78100 | 95.20 | USA African American pop 5 | E*01:01 | 0.56600 | USA African American pop 6 | G*01:01:01 | 0.70200 | USA Alaska Yupik | A*24:02 | 0.58100 | DQB1*03:01 | 0.61700 | USA Arizona Gila River Amerindian | DQA1*05:01 | 0.88900 | DQB1*03:01 | 0.89600 | DRB1*14:02 | 0.74600 | USA Arizona Gila River Pima | DPA1*01:03:01 | 0.97829 | DPB1*04:02:01 | 0.51071 | DQA1*05:03:01 | 0.79580 | DRB1*14:02:01 | 0.69838 | USA Arizona Pima | DPA1*01:03 | 0.95400 | USA Arizona Pima pop2 | DPA1*01:03 | 1.00000 | DPB1*04:02 | 0.52900 | DQA1*05:01 | 0.94100 | DQB1*03:01 | 0.94100 | DRB1*14:02 | 0.79400 | USA New Mexico Zuni | DPB1*04:02 | 0.62000 | DQA1*05:01 | 0.58000 | DQB1*03:01 | 0.55000 | USA South Dakota Hutteritie | G*01:01 | 0.79800 | USA South Dakota Sioux | DQA1*03:01:01 | 0.52100 | USA Virginia Caucasian | DMA*01:01 | 0.85400 | DMB*01:01 | 0.74900 | Venezuela Aroy Yucpa | DPA1*02:01 | 0.70600 | DPB1*04:02 | 0.67600 | Venezuela Campo Rosario Bari | DPA1*01 | 0.74600 | Venezuela Marewa Yucpa | DPA1*01 | 0.84500 | DPB1*04:02 | 0.84500 | Venezuela Orinoco Delta Warao | DPA1*01 | 0.72100 | DPB1*04:02 | 0.85300 | Venezuela Peraya Yucpa | DPA1*01 | 0.88500 | DPB1*04:02 | 0.88500 | Venezuela Perja Mountain Bari | A*24:02:01:01 | 0.60200 | Venezuela Saimadoyi Bari | DPA1*01 | 0.81400 | Venezuela Sierra de Perija Yucpa | C*07:02 | 0.71400 | DPB1*04:02 | 0.78600 | DQA1*03:01:01 | 0.75000 | DQB1*03:02 | 0.73900 | DRB1*04:11 | 0.61400 | Vietnam Hanoi | DQB1*03 | 0.51000 |
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Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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