HLA > Allele Frequency Search > Classical

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Displaying 1 to 51 (from 51) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   A*02:01:01  USA New Mexico Canoncito Navajo  0.378042See
 2   A*02:06  USA New Mexico Canoncito Navajo  0.049042See
 3   A*24:02:01:01  USA New Mexico Canoncito Navajo  0.305042See
 4   A*31:01:02  USA New Mexico Canoncito Navajo  0.268042See
 5   B*15:01:01  USA New Mexico Canoncito Navajo  0.012042See
 6   B*15:07  USA New Mexico Canoncito Navajo  0.037042See
 7   B*27:05  USA New Mexico Canoncito Navajo  0.037042See
 8   B*35:01  USA New Mexico Canoncito Navajo  0.207042See
 9   B*38:01:01  USA New Mexico Canoncito Navajo  0.037042See
 10   B*39:01  USA New Mexico Canoncito Navajo  0.146042See
 11   B*39:01:01  USA New Mexico Canoncito Navajo  0.012042See
 12   B*39:06  USA New Mexico Canoncito Navajo  0.037042See
 13   B*40:02  USA New Mexico Canoncito Navajo  0.049042See
 14   B*40:19  USA New Mexico Canoncito Navajo  0.024042See
 15   B*48:01  USA New Mexico Canoncito Navajo  0.098042See
 16   B*51:01:01  USA New Mexico Canoncito Navajo  0.049042See
 17   B*51:02:01  USA New Mexico Canoncito Navajo  0.134042See
 18   B*53:01  USA New Mexico Canoncito Navajo  0.085042See
 19   B*53:03  USA New Mexico Canoncito Navajo  0.024042See
 20   B*78:01  USA New Mexico Canoncito Navajo  0.012042See
 21   C*01:02  USA New Mexico Canoncito Navajo  0.037042See
 22   C*02:02:02  USA New Mexico Canoncito Navajo  0.037042See
 23   C*03:04:01  USA New Mexico Canoncito Navajo  0.073042See
 24   C*04:01  USA New Mexico Canoncito Navajo  0.317042See
 25   C*07:02  USA New Mexico Canoncito Navajo  0.232042See
 26   C*08:01  USA New Mexico Canoncito Navajo  0.244042See
 27   C*15:02  USA New Mexico Canoncito Navajo  0.061042See
 28   DPB1*02:01  USA New Mexico Canoncito Navajo  0.138042See
 29   DPB1*03:01  USA New Mexico Canoncito Navajo  0.025042See
 30   DPB1*04:01  USA New Mexico Canoncito Navajo  0.313042See
 31   DPB1*04:02  USA New Mexico Canoncito Navajo  0.475042See
 32   DPB1*05:01  USA New Mexico Canoncito Navajo  0.038042See
 33   DPB1*14:01  USA New Mexico Canoncito Navajo  0.013042See
 34   DQA1*01:01  USA New Mexico Canoncito Navajo  0.025042See
 35   DQA1*03:01:01  USA New Mexico Canoncito Navajo  0.063042See
 36   DQA1*04:01  USA New Mexico Canoncito Navajo  0.425042See
 37   DQA1*05:01  USA New Mexico Canoncito Navajo  0.488042See
 38   DQB1*03:01  USA New Mexico Canoncito Navajo  0.488042See
 39   DQB1*03:02  USA New Mexico Canoncito Navajo  0.038042See
 40   DQB1*03:03  USA New Mexico Canoncito Navajo  0.013042See
 41   DQB1*04:01  USA New Mexico Canoncito Navajo  0.013042See
 42   DQB1*04:02  USA New Mexico Canoncito Navajo  0.425042See
 43   DQB1*05:03  USA New Mexico Canoncito Navajo  0.025042See
 44   DRB1*04:06  USA New Mexico Canoncito Navajo  0.013042See
 45   DRB1*04:07  USA New Mexico Canoncito Navajo  0.038042See
 46   DRB1*08:02  USA New Mexico Canoncito Navajo  0.438042See
 47   DRB1*09:01  USA New Mexico Canoncito Navajo  0.013042See
 48   DRB1*14:01  USA New Mexico Canoncito Navajo  0.038042See
 49   DRB1*14:02  USA New Mexico Canoncito Navajo  0.338042See
 50   DRB1*14:06  USA New Mexico Canoncito Navajo  0.013042See
 51   DRB1*16:02  USA New Mexico Canoncito Navajo  0.113042See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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