HLA > Allele Frequency Search > Classical

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Displaying 1 to 51 (from 51) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   DQA1*01:01  Cook Islands Rarotonga  0.115078See
 2   DQA1*01:02  Cook Islands Rarotonga  0.045078See
 3   DQA1*01:03  Cook Islands Rarotonga  0.064078See
 4   DQA1*02:01  Cook Islands Rarotonga  0.006078See
 5   DQA1*03:01  Cook Islands Rarotonga  0.365078See
 6   DQA1*04:01  Cook Islands Rarotonga  0.026078See
 7   DQA1*05:01  Cook Islands Rarotonga  0.372078See
 8   DQA1*06:01  Cook Islands Rarotonga  0.006078See
 9   DQB1*02:01  Cook Islands Rarotonga  0.013078See
 10   DQB1*03:01  Cook Islands Rarotonga  0.385078See
 11   DQB1*03:02  Cook Islands Rarotonga  0.205078See
 12   DQB1*03:03  Cook Islands Rarotonga  0.090078See
 13   DQB1*04:01  Cook Islands Rarotonga  0.006078See
 14   DQB1*04:02  Cook Islands Rarotonga  0.077078See
 15   DQB1*05:01  Cook Islands Rarotonga  0.006078See
 16   DQB1*05:02  Cook Islands Rarotonga  0.032078See
 17   DQB1*05:03  Cook Islands Rarotonga  0.096078See
 18   DQB1*06:01  Cook Islands Rarotonga  0.058078See
 19   DQB1*06:02  Cook Islands Rarotonga  0.013078See
 20   DQB1*06:03  Cook Islands Rarotonga  078See
 21   DQB1*06:04  Cook Islands Rarotonga  0.013078See
 22   DQB1*06:05  Cook Islands Rarotonga  0.006078See
 23   DRB1*01:01  Cook Islands Rarotonga  0.006078See
 24   DRB1*01:03  Cook Islands Rarotonga  0.006078See
 25   DRB1*03:01  Cook Islands Rarotonga  0.006078See
 26   DRB1*03:02  Cook Islands Rarotonga  078See
 27   DRB1*04:01  Cook Islands Rarotonga  0.026078See
 28   DRB1*04:02  Cook Islands Rarotonga  0.006078See
 29   DRB1*04:03  Cook Islands Rarotonga  0.180078See
 30   DRB1*04:04  Cook Islands Rarotonga  0.006078See
 31   DRB1*04:05  Cook Islands Rarotonga  0.051078See
 32   DRB1*04:06  Cook Islands Rarotonga  078See
 33   DRB1*04:10  Cook Islands Rarotonga  0.006078See
 34   DRB1*07  Cook Islands Rarotonga  0.006078See
 35   DRB1*08:01  Cook Islands Rarotonga  078See
 36   DRB1*08:02  Cook Islands Rarotonga  0.026078See
 37   DRB1*08:03  Cook Islands Rarotonga  0.058078See
 38   DRB1*09:01:02  Cook Islands Rarotonga  0.090078See
 39   DRB1*10:01  Cook Islands Rarotonga  078See
 40   DRB1*11:01  Cook Islands Rarotonga  0.205078See
 41   DRB1*11:02  Cook Islands Rarotonga  0.006078See
 42   DRB1*12:01  Cook Islands Rarotonga  0.147078See
 43   DRB1*12:02  Cook Islands Rarotonga  0.006078See
 44   DRB1*13:01  Cook Islands Rarotonga  078See
 45   DRB1*13:02  Cook Islands Rarotonga  0.019078See
 46   DRB1*14:01  Cook Islands Rarotonga  0.051078See
 47   DRB1*14:04  Cook Islands Rarotonga  0.006078See
 48   DRB1*14:05  Cook Islands Rarotonga  078See
 49   DRB1*14:08  Cook Islands Rarotonga  0.051078See
 50   DRB1*15:01  Cook Islands Rarotonga  0.013078See
 51   DRB1*15:02  Cook Islands Rarotonga  0.019078See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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