HLA > Allele Frequency Search > Classical

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Displaying 1 to 39 (from 39) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Allele
Frequency
(in_decimals)
Sample
Size
IMGT/HLA¹
Database
Distribution² Haplotype³
Association
Notesª
 1   B*07:02:01  India Andhra Pradesh Telugu Speaking 5.4 0.0269186See
 2   B*07:05:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 3   B*07:06:01  India Andhra Pradesh Telugu Speaking 8.6 0.0430186See
 4   B*08:01:01  India Andhra Pradesh Telugu Speaking 3.2 0.0188186See
 5   B*13:01:01  India Andhra Pradesh Telugu Speaking 3.2 0.0161186See
 6   B*13:02:01  India Andhra Pradesh Telugu Speaking 3.2 0.0161186See
 7   B*15:01:01  India Andhra Pradesh Telugu Speaking 1.6 0.0081186See
 8   B*15:02:01  India Andhra Pradesh Telugu Speaking 2.2 0.0108186See
 9   B*15:05:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 10   B*15:08:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 11   B*15:17:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 12   B*15:18:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 13   B*15:25:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 14   B*18:01:01  India Andhra Pradesh Telugu Speaking 4.8 0.0242186See
 15   B*27:05:02  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 16   B*35:01:01  India Andhra Pradesh Telugu Speaking 10.2 0.0511186See
 17   B*35:03:01  India Andhra Pradesh Telugu Speaking 11.8 0.0645186See
 18   B*37:01:01  India Andhra Pradesh Telugu Speaking 8.6 0.0430186See
 19   B*38:02:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 20   B*39:01:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 21   B*40:01:02  India Andhra Pradesh Telugu Speaking 4.3 0.0242186See
 22   B*40:02:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 23   B*40:06:01  India Andhra Pradesh Telugu Speaking 18.3 0.0968186See
 24   B*40:06:04  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 25   B*40:26  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 26   B*44:02:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 27   B*44:03:02  India Andhra Pradesh Telugu Speaking 11.3 0.0591186See
 28   B*48:04:01  India Andhra Pradesh Telugu Speaking 3.8 0.0188186See
 29   B*49:01:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 30   B*50:01:01  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 31   B*51:01:01  India Andhra Pradesh Telugu Speaking 21.5 0.1129186See
 32   B*51:01:05  India Andhra Pradesh Telugu Speaking 1.1 0.0054186See
 33   B*51:06:01  India Andhra Pradesh Telugu Speaking 2.7 0.0134186See
 34   B*52:01:01  India Andhra Pradesh Telugu Speaking 16.1 0.0860186See
 35   B*55:01:01  India Andhra Pradesh Telugu Speaking 4.3 0.0242186See
 36   B*55:01:04  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 37   B*56:01:01  India Andhra Pradesh Telugu Speaking 0.5 0.0027186See
 38   B*57:01:01  India Andhra Pradesh Telugu Speaking 17.7 0.0887186See
 39   B*58:01:01  India Andhra Pradesh Telugu Speaking 8.6 0.0430186See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.







   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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