HLA > Allele Frequency Search > Classical

Please specify your search by selecting options from boxes. Then, click "Search" to find HLA allele frequencies that match your criteria. Remember at least one option must be selected.
Locus:  Starting Allele:  Ending Allele:  > (Type your allele e.g. A*01:01, etc. or leave both empty to include all alleles)
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Population standard: Gold only Gold and Silver All Show frequencies: All Only positives Only negatives
Displaying 1 to 93 (from 93) records   Pages: 1 of 1  

Line Allele Population % of individuals
that have the allele
Distribution² Haplotype³
 1   A*02:01  Papua New Guinea Madang  065See
 2   A*02:06  Papua New Guinea Madang  065See
 3   A*03:01  Papua New Guinea Madang  065See
 4   A*11:01  Papua New Guinea Madang  0.636065See
 5   A*24:02  Papua New Guinea Madang  0.153065See
 6   A*24:07  Papua New Guinea Madang  065See
 7   A*25:01  Papua New Guinea Madang  065See
 8   A*26:01  Papua New Guinea Madang  0.025065See
 9   A*31:01:02  Papua New Guinea Madang  0.051065See
 10   A*32:01  Papua New Guinea Madang  065See
 11   A*34:01  Papua New Guinea Madang  0.136065See
 12   A*68:02  Papua New Guinea Madang  065See
 13   B*07:02  Papua New Guinea Madang  065See
 14   B*13:01  Papua New Guinea Madang  0.191065See
 15   B*14:01  Papua New Guinea Madang  065See
 16   B*15:01  Papua New Guinea Madang  065See
 17   B*15:05  Papua New Guinea Madang  065See
 18   B*15:06  Papua New Guinea Madang  0.191065See
 19   B*15:21  Papua New Guinea Madang  065See
 20   B*15:25  Papua New Guinea Madang  065See
 21   B*15:36  Papua New Guinea Madang  0.073065See
 22   B*18:01  Papua New Guinea Madang  0.009065See
 23   B*27:04  Papua New Guinea Madang  0.055065See
 24   B*27:06  Papua New Guinea Madang  065See
 25   B*35:05  Papua New Guinea Madang  065See
 26   B*39:01  Papua New Guinea Madang  0.064065See
 27   B*39:03  Papua New Guinea Madang  065See
 28   B*39:06  Papua New Guinea Madang  065See
 29   B*40:01  Papua New Guinea Madang  065See
 30   B*40:02  Papua New Guinea Madang  0.018065See
 31   B*40:10  Papua New Guinea Madang  0.018065See
 32   B*44:02  Papua New Guinea Madang  065See
 33   B*48:01  Papua New Guinea Madang  0.018065See
 34   B*51:01  Papua New Guinea Madang  065See
 35   B*53:01  Papua New Guinea Madang  065See
 36   B*55:02  Papua New Guinea Madang  0.009065See
 37   B*56:01  Papua New Guinea Madang  0.346065See
 38   B*56:02  Papua New Guinea Madang  0.009065See
 39   C*01:02  Papua New Guinea Madang  0.147065See
 40   C*02:02  Papua New Guinea Madang  065See
 41   C*03:03  Papua New Guinea Madang  065See
 42   C*03:04  Papua New Guinea Madang  0.095065See
 43   C*04:01  Papua New Guinea Madang  0.095065See
 44   C*04:03  Papua New Guinea Madang  0.250065See
 45   C*07:01  Papua New Guinea Madang  065See
 46   C*07:02  Papua New Guinea Madang  0.302065See
 47   C*08:01  Papua New Guinea Madang  0.026065See
 48   C*08:02  Papua New Guinea Madang  065See
 49   C*12:02  Papua New Guinea Madang  0.060065See
 50   C*12:03  Papua New Guinea Madang  0.017065See
 51   C*15:02  Papua New Guinea Madang  0.009065See
 52   DQA1*01:01  Papua New Guinea Madang  0.031065See
 53   DQA1*01:02  Papua New Guinea Madang  0.385065See
 54   DQA1*01:03  Papua New Guinea Madang  0.015065See
 55   DQA1*02:01  Papua New Guinea Madang  065See
 56   DQA1*03:01  Papua New Guinea Madang  0.046065See
 57   DQA1*04:01  Papua New Guinea Madang  065See
 58   DQA1*05:01  Papua New Guinea Madang  0.523065See
 59   DQB1*02:01  Papua New Guinea Madang  065See
 60   DQB1*03:01  Papua New Guinea Madang  0.523065See
 61   DQB1*03:02  Papua New Guinea Madang  0.015065See
 62   DQB1*03:03  Papua New Guinea Madang  0.008065See
 63   DQB1*04:01  Papua New Guinea Madang  0.015065See
 64   DQB1*04:02  Papua New Guinea Madang  0.008065See
 65   DQB1*05:01  Papua New Guinea Madang  0.008065See
 66   DQB1*05:02  Papua New Guinea Madang  0.169065See
 67   DQB1*05:03  Papua New Guinea Madang  0.008065See
 68   DQB1*06:01  Papua New Guinea Madang  0.231065See
 69   DQB1*06:02  Papua New Guinea Madang  0.015065See
 70   DQB1*06:03  Papua New Guinea Madang  065See
 71   DRB1*01:01  Papua New Guinea Madang  065See
 72   DRB1*01:03  Papua New Guinea Madang  065See
 73   DRB1*03:01  Papua New Guinea Madang  065See
 74   DRB1*04:01  Papua New Guinea Madang  065See
 75   DRB1*04:03  Papua New Guinea Madang  0.015065See
 76   DRB1*04:04  Papua New Guinea Madang  065See
 77   DRB1*04:05  Papua New Guinea Madang  0.023065See
 78   DRB1*04:08  Papua New Guinea Madang  065See
 79   DRB1*04:10  Papua New Guinea Madang  065See
 80   DRB1*07:01  Papua New Guinea Madang  065See
 81   DRB1*08:01  Papua New Guinea Madang  065See
 82   DRB1*08:03  Papua New Guinea Madang  0.015065See
 83   DRB1*09:01:02  Papua New Guinea Madang  0.008065See
 84   DRB1*11:01  Papua New Guinea Madang  0.454065See
 85   DRB1*11:04  Papua New Guinea Madang  0.062065See
 86   DRB1*12:01  Papua New Guinea Madang  0.008065See
 87   DRB1*13:01  Papua New Guinea Madang  065See
 88   DRB1*14:01  Papua New Guinea Madang  0.023065See
 89   DRB1*14:07  Papua New Guinea Madang  065See
 90   DRB1*14:08  Papua New Guinea Madang  065See
 91   DRB1*15:01  Papua New Guinea Madang  0.046065See
 92   DRB1*15:02  Papua New Guinea Madang  0.200065See
 93   DRB1*16:02  Papua New Guinea Madang  0.146065See


* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.


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