HLA > Allele Frequency Search > Classical

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Displaying 1 to 100 (from 164) records   Pages: 1 2 of 2  

Line Allele Population % of individuals
that have the allele		 Allele
Frequency
(in_decimals)		 Sample
Size		 IMGT/HLA¹
Database		 Distribution² Haplotype³
Association		 Notesª
 1   A*01:01:01  Nicaragua Mestizo (G) 5.8 (*) 0.0290 (*)155See
 2   A*02:01:01  Nicaragua Mestizo (G) 36.2 (*) 0.1940 (*)155See
 3   A*02:02  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 4   A*02:05:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 5   A*02:06:01  Nicaragua Mestizo (G) 7.8 (*) 0.0390 (*)155See
 6   A*02:22:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 7   A*02:33  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 8   A*03:01:01  Nicaragua Mestizo (G) 11.0 (*) 0.0550 (*)155See
 9   A*11:01:01  Nicaragua Mestizo (G) 9.6 (*) 0.0480 (*)155See
 10   A*23:01:01  Nicaragua Mestizo (G) 6.4 (*) 0.0320 (*)155See
 11   A*24:02:01  Nicaragua Mestizo (G) 25.9 (*) 0.1390 (*)155See
 12   A*24:03:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 13   A*25:01:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 14   A*26:01:01  Nicaragua Mestizo (G) 7.2 (*) 0.0360 (*)155See
 15   A*29:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 16   A*29:02:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 17   A*30:01:01  Nicaragua Mestizo (G) 5.8 (*) 0.0290 (*)155See
 18   A*30:02:01  Nicaragua Mestizo (G) 6.4 (*) 0.0320 (*)155See
 19   A*30:04:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 20   A*31:01:02  Nicaragua Mestizo (G) 16.2 (*) 0.0840 (*)155See
 21   A*32:01:01  Nicaragua Mestizo (G) 5.2 (*) 0.0260 (*)155See
 22   A*33:01:01  Nicaragua Mestizo (G) 3.2 (*) 0.0160 (*)155See
 23   A*33:03:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 24   A*34:02:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 25   A*66:01:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 26   A*68:01:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 27   A*68:01:02  Nicaragua Mestizo (G) 11.6 (*) 0.0580 (*)155See
 28   A*68:02:01  Nicaragua Mestizo (G) 4.6 (*) 0.0230 (*)155See
 29   A*68:03:01  Nicaragua Mestizo (G) 7.8 (*) 0.0390 (*)155See
 30   A*68:05  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 31   A*68:07  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 32   A*69:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 33   A*74:01  Nicaragua Mestizo (G) 2.0 (*) 0.0100 (*)155See
 34   B*07:02:01  Nicaragua Mestizo (G) 12.2 (*) 0.0610 (*)155See
 35   B*07:05:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 36   B*08:01:01  Nicaragua Mestizo (G) 7.2 (*) 0.0360 (*)155See
 37   B*13:02:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 38   B*14:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 39   B*14:02:01  Nicaragua Mestizo (G) 7.8 (*) 0.0390 (*)155See
 40   B*14:02:02  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 41   B*15:01:01  Nicaragua Mestizo (G) 4.6 (*) 0.0230 (*)155See
 42   B*15:03:01  Nicaragua Mestizo (G) 3.8 (*) 0.0190 (*)155See
 43   B*15:10:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 44   B*15:15  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 45   B*15:30  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 46   B*18:01:01  Nicaragua Mestizo (G) 4.6 (*) 0.0230 (*)155See
 47   B*27:02:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 48   B*27:05:02  Nicaragua Mestizo (G) 2.0 (*) 0.0100 (*)155See
 49   B*35:01:01  Nicaragua Mestizo (G) 17.4 (*) 0.0900 (*)155See
 50   B*35:03:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 51   B*35:05:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 52   B*35:08:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 53   B*35:12:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 54   B*35:17:01  Nicaragua Mestizo (G) 7.8 (*) 0.0390 (*)155See
 55   B*35:20:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 56   B*35:43:01  Nicaragua Mestizo (G) 7.2 (*) 0.0360 (*)155See
 57   B*37:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 58   B*38:01:01  Nicaragua Mestizo (G) 3.2 (*) 0.0190 (*)155See
 59   B*38:02:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 60   B*39:02:02  Nicaragua Mestizo (G) 3.2 (*) 0.0160 (*)155See
 61   B*39:05:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 62   B*39:06:02  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 63   B*39:08  Nicaragua Mestizo (G) 4.6 (*) 0.0230 (*)155See
 64   B*39:11  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 65   B*39:24:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 66   B*40:01:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 67   B*40:02:01  Nicaragua Mestizo (G) 20.8 (*) 0.1070 (*)155See
 68   B*40:04  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 69   B*40:08  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 70   B*40:11:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 71   B*40:27:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 72   B*41:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 73   B*41:02:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 74   B*42:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 75   B*44:02:01  Nicaragua Mestizo (G) 5.2 (*) 0.0260 (*)155See
 76   B*44:03:01  Nicaragua Mestizo (G) 7.8 (*) 0.0390 (*)155See
 77   B*44:10  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 78   B*45:01  Nicaragua Mestizo (G) 3.8 (*) 0.0190 (*)155See
 79   B*47:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 80   B*48:01:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 81   B*49:01:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 82   B*50:01:01  Nicaragua Mestizo (G) 2.0 (*) 0.0100 (*)155See
 83   B*50:02  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 84   B*51:01:01  Nicaragua Mestizo (G) 9.0 (*) 0.0450 (*)155See
 85   B*51:02:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 86   B*52:01:01  Nicaragua Mestizo (G) 4.6 (*) 0.0230 (*)155See
 87   B*52:01:02  Nicaragua Mestizo (G) 5.2 (*) 0.0260 (*)155See
 88   B*53:01:01  Nicaragua Mestizo (G) 5.8 (*) 0.0290 (*)155See
 89   B*55:01:01  Nicaragua Mestizo (G) 1.4 (*) 0.0070 (*)155See
 90   B*56:01:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 91   B*57:03:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 92   B*58:01:01  Nicaragua Mestizo (G) 2.6 (*) 0.0130 (*)155See
 93   B*58:02  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 94   B*81:01  Nicaragua Mestizo (G) 0.6 (*) 0.0030 (*)155See
 95   C*01:02:01  Nicaragua Mestizo (G) 16.8 (*) 0.0870 (*)155See
 96   C*02:02:02  Nicaragua Mestizo (G) 3.2 (*) 0.0160 (*)155See
 97   C*02:10  Nicaragua Mestizo (G) 3.2 (*) 0.0160 (*)155See
 98   C*03:02:01  Nicaragua Mestizo (G) 2.0 (*) 0.0100 (*)155See
 99   C*03:03:01  Nicaragua Mestizo (G) 6.4 (*) 0.0320 (*)155See
 100   C*03:04:01  Nicaragua Mestizo (G) 10.4 (*) 0.0520 (*)155See

Notes:

* Allele Frequency: Total number of copies of the allele in the population sample (Alleles / 2n) in decimal format.
   Important: This field has been expanded to four decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
* % of individuals that have the allele: Percentage of individuals who have the allele in the population (Individuals / n).
* Allele Frequencies shown in green were calculated from Phenotype Frequencies assuming Hardy-Weinberg proportions.
   AF = 1-square_root(1-PF)
   PF = 1-(1-AF)2
   AF = Allele Frequency; PF = Phenotype Frequency, i.e. (%) of the individuals carrying the allele.
* Allele Frequencies marked with (*) were calculated from all alleles in the corresponding G group.

¹ IMGT/HLA Database - For more details of the allele.
² Distribution - Graphical distribution of the allele.
³ Haplotype Association - Find HLA haplotypes with this allele.
ª Notes - See notes for ambiguous combinations of alleles.


Displaying 1 to 100 (from 164) records   Pages: 1 2 of 2  





   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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